Here's what happens:
A .doc file previously created in Word for Windows includes the following content tree items:
com.microsoft.word.doc, public.data, public.item, public.composite-content, public.content
If I open one of these files in Word 2008 (even if I don't make any changes or re-save it), the content tree is reduced to:
com.microsoft.word.doc, public.data, public.item
If I use Spotlight (the full-blown Spotlight search invoked with Cmd-F in the Finder or Opt-Cmd-Space, not the simple Spotlight search in the top right corner of the screen) to search for documents, the absence of the public.content attribute from the content tree means that these files no longer appear if I restrict the search by setting "Kind" to "Documents."
The public.content attribute appears in documents created by other applications, including Acrobat Pro and TextEdit, for example. As a result, files created by these programs appear in a Kind = Documents search. For some reason, Word 2008 is inadvertently stripping off the public.content attribute.
I wasted a half hour looking for a file before I figured out what was happening! Now that I know what Word is doing, I can search for file names ending in "doc" to include Word 2008 files in a search. That's a kludgy workaround, and I'm hoping that MS will fix this soon.